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[Superseded] Superseded by parseMSP rewrite 2025-08

Usage

parseMSP(
  fileSpectra,
  minimumIntensityOfMaximalMS2peak,
  minimumProportionOfMS2peaks,
  neutralLossesPrecursorToFragments,
  neutralLossesFragmentsToFragments,
  progress = FALSE,
  ...
)

Arguments

fileSpectra

filepath

minimumIntensityOfMaximalMS2peak

numeric

minimumProportionOfMS2peaks

numeric

neutralLossesPrecursorToFragments

boolean

neutralLossesFragmentsToFragments

boolean

progress

boolean

...

ignored. Used for forward compatibility.

Value

list object

Details

Read MS2 spectra from MSP file