Skip to contents

Process MS-Dial-like MS1 data.frame

processMS1data.Rd

Processing of MS-Dial-like MS1 data.frame. Includes calculation of MS1 data mean and log-fold-change (LFC) data

Usage

processMS1data(
  sampleNamesToExclude,
  numberOfMS1features,
  precursorLabels,
  grouXXXps,
  metaboliteProfileColumnNames,
  dataColumnIndecesFunctionFromGroupIndex,
  dataColumnsNameFunctionFromGroupIndex,
  dataColumnsNameFunctionFromGroupName,
  dataColumnsNameFunctionFromGroupNames,
  groupNameFunctionFromDataColumnName,
  tagsSector,
  metaboliteProfile,
  progress = FALSE
)

Arguments

sampleNamesToExclude
numberOfMS1features
precursorLabels
grouXXXps
metaboliteProfileColumnNames
dataColumnIndecesFunctionFromGroupIndex
dataColumnsNameFunctionFromGroupIndex
dataColumnsNameFunctionFromGroupName
dataColumnsNameFunctionFromGroupNames
groupNameFunctionFromDataColumnName
tagsSector
metaboliteProfile
progress